Msp_g22519

Description : ARF-GTPase guanyl-nucleotide exchange factor *(BIG) & original description: none

Gene families : OG0001094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g22519
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00145310	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
AMTR_s00041p00031550	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
AT1G01960	EDA10	SEC7-like guanine nucleotide exchange family protein	0.02	OrthoFinder output from all 47 species
AT3G43300	ATMIN7, BEN1	HOPM interactor 7	0.05	OrthoFinder output from all 47 species
AT3G60860	No alias	SEC7-like guanine nucleotide exchange family protein	0.05	OrthoFinder output from all 47 species
AT4G38200	No alias	SEC7-like guanine nucleotide exchange family protein	0.04	OrthoFinder output from all 47 species
Adi_g019376	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.08	OrthoFinder output from all 47 species
Adi_g019462	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Ala_g02716	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Ala_g11392	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Als_g01210	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.04	OrthoFinder output from all 47 species
Azfi_s0048.g030483	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.06	OrthoFinder output from all 47 species
Azfi_s0199.g057483	EDA10	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.05	OrthoFinder output from all 47 species
Cba_g01354	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Cba_g14684	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Ceric.10G045100.1	Ceric.10G045100	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Ceric.35G045800.1	ATMIN7, BEN1,...	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.04	OrthoFinder output from all 47 species
Cre09.g390319	EDA10	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	OrthoFinder output from all 47 species
Dcu_g05847	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.05	OrthoFinder output from all 47 species
Dcu_g10762	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.09	OrthoFinder output from all 47 species
Dde_g10500	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.04	OrthoFinder output from all 47 species
Ehy_g17896	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01014993001	ATMIN7, BEN1	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.04	OrthoFinder output from all 47 species
GSVIVT01023854001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	OrthoFinder output from all 47 species
GSVIVT01027623001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	OrthoFinder output from all 47 species
Gb_04048	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
Gb_07642	ATMIN7, BEN1	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
LOC_Os03g14260.1	LOC_Os03g14260	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.07	OrthoFinder output from all 47 species
LOC_Os06g41780.2	LOC_Os06g41780	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
LOC_Os07g37750.1	ATMIN7, BEN1,...	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.09	OrthoFinder output from all 47 species
Len_g10327	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Lfl_g02471	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.05	OrthoFinder output from all 47 species
Lfl_g04291	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
MA_10429864g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	OrthoFinder output from all 47 species
MA_20138g0010	ATMIN7, BEN1	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.02	OrthoFinder output from all 47 species
MA_20563g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
MA_9806849g0010	No alias	Brefeldin A-inhibited guanine nucleotide-exchange...	0.02	OrthoFinder output from all 47 species
Mp7g11590.1	ATMIN7, BEN1	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Mp8g18220.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.07	OrthoFinder output from all 47 species
Nbi_g01508	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.07	OrthoFinder output from all 47 species
Nbi_g01512	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.05	OrthoFinder output from all 47 species
Ore_g16676	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.05	OrthoFinder output from all 47 species
Ore_g30550	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Pp3c21_12080V3.1	ATMIN7, BEN1,...	HOPM interactor 7	0.02	OrthoFinder output from all 47 species
Sam_g29233	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.02	OrthoFinder output from all 47 species
Smo85621	ATMIN7, BEN1	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
Solyc01g091460.3.1	Solyc01g091460	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Solyc01g112350.3.1	Solyc01g112350	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Solyc12g017830.3.1	ATMIN7, BEN1,...	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Spa_g09296	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.03	OrthoFinder output from all 47 species
Tin_g02915	ATMIN7, BEN1	ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &...	0.06	OrthoFinder output from all 47 species
Zm00001e001058_P001	Zm00001e001058	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Zm00001e010568_P001	ATMIN7, BEN1,...	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.09	OrthoFinder output from all 47 species
Zm00001e037574_P001	Zm00001e037574	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0032012	regulation of ARF protein signal transduction	IEA	Interproscan
BP	GO:0046578	regulation of Ras protein signal transduction	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051056	regulation of small GTPase mediated signal transduction	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015403	Mon2/Sec7/BIG1-like_HDS	1170	1252
IPR032629	DCB_dom	14	223
IPR032817	Mon2_C	1285	1402
IPR032691	Mon2/Sec7/BIG1-like_HUS	347	504
IPR046455	Sec7/BIG1-like_C	1564	1766
IPR000904	Sec7_dom	619	800

External Links

No external refs found!

Msp_g22519

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation