Msp_g21524 (COBL2)

Aliases : COBL2

Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none

Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g21524
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
Als_g15085	COBL2	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
Aob_g05189	COBL10	regulatory protein *(COB) of cellulose-hemicellulose...	0.02	OrthoFinder output from all 47 species
LOC_Os03g30250.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
MA_40967g0020	COB	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species
Solyc03g070440.4.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc03g114900.3.1	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Solyc09g075540.1.1	SEB1, COBL7,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Tin_g40847	IRX6, COBL4	regulatory protein *(COB) of cellulose-hemicellulose...	0.03	OrthoFinder output from all 47 species
Zm00001e035505_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.03	OrthoFinder output from all 47 species
Zm00001e038043_P001	IRX6, COBL4,...	COB cellulose microfibrils and hemicellulose interaction protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010215	cellulose microfibril organization	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0030198	extracellular matrix organization	None	Extended
BP	GO:0043062	extracellular structure organization	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006465	signal peptide processing	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016485	protein processing	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006918	COBRA_pln	95	252

External Links

No external refs found!