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  5. Msp_g20007

Msp_g20007 (ATPIN1, PIN1)


Aliases : ATPIN1, PIN1

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g20007
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.02 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g011681 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050328 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g081464 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26431 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26968 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01020.t1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04220.t1 PIN3, ATPIN3,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71262.t1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0215.g058367 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.15G033200.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g03399 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06420 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07064 PIN7, ATPIN7 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26392 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32340 PIN6 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025749001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
LOC_Os01g69070.1 PIN5, LOC_Os01g69070 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os06g12610.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os11g04190.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Len_g02406 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12533 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g14570 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40526 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Nbi_g04385 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12616 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29643 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011672 PIN6 auxin efflux transporter *(PIN) & original description:... 0.04 OrthoFinder output from all 47 species
Smo119024 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Smo234325 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Solyc06g059730.3.1 PIN6, Solyc06g059730 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Spa_g23448 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25895 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48925 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015800_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 707
No external refs found!