Heatmap: Cluster_26 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
-0.36 -0.35 -0.23 -0.28 -0.14 -0.01 0.89
-0.34 -0.8 -0.62 -0.64 -0.33 0.31 1.21
-3.09 -3.48 -2.04 -2.22 -1.48 0.31 2.24
-4.5 -6.28 - -7.45 -4.15 0.49 2.45
Msp_g02455 (scpl44)
-0.81 -0.93 -1.46 -0.77 -1.92 0.01 1.88
Msp_g03198 (SD2-5)
-4.07 -1.94 -3.09 -1.75 -0.98 -0.33 2.31
Msp_g03461 (LOB)
-0.61 -2.12 -2.43 -1.71 -2.66 0.57 1.99
-0.17 -0.49 -0.3 -0.29 -0.37 0.24 0.86
-1.85 -1.21 -1.82 -1.49 -1.15 -0.39 2.15
-3.17 -2.09 -2.88 -2.07 -0.75 0.25 2.17
-2.98 -5.58 -7.37 -5.6 -2.01 0.75 2.29
-0.45 -0.49 -0.47 -0.31 -0.64 0.08 1.22
-3.67 - - - -1.27 0.64 2.31
-2.93 -5.19 -4.94 - -2.59 0.63 2.35
Msp_g05642 (SYN4)
-0.51 -0.44 -0.85 -0.24 -0.2 -0.11 1.24
-3.43 -4.49 -3.08 -4.73 -2.29 -0.14 2.48
-4.53 -5.76 -5.72 -4.78 -1.49 -0.18 2.5
-0.53 -3.08 -2.21 -1.51 -2.93 -0.08 2.19
Msp_g07799 (CCD4)
-1.65 -2.62 -3.29 -1.12 -2.32 0.55 2.1
-0.33 -2.22 -1.88 -2.15 -0.73 0.43 1.82
-2.58 -0.49 -3.1 -0.86 -0.76 -0.03 1.96
-1.71 -1.51 -2.24 -1.13 -0.19 0.02 1.92
Msp_g08965 (PIRL1)
-1.81 - -7.48 - -1.12 0.88 2.14
-3.52 -3.23 -3.52 -1.76 -0.84 1.04 1.93
-1.81 -1.12 -1.31 -0.74 -1.29 0.02 1.94
Msp_g09181 (PTR1)
-1.55 -0.9 -1.78 -0.88 -0.57 0.22 1.79
Msp_g09561 (TL2)
-0.74 -1.55 -1.15 -1.24 -0.74 0.78 1.52
-0.31 -1.8 -2.86 -1.35 -0.48 0.72 1.59
-0.0 -0.6 -0.49 -0.66 -0.38 0.37 0.96
-1.98 -4.29 -5.76 -2.3 -1.15 1.12 1.94
-4.19 -2.07 -3.61 -1.88 -1.23 0.06 2.29
-0.11 -0.65 -0.77 -0.63 -0.34 0.32 1.11
-0.45 -1.07 -1.69 -0.93 -0.22 -0.01 1.64
Msp_g11433 (NIP6)
-2.82 -3.6 -4.11 -3.5 -0.74 1.13 1.94
-2.83 -2.0 -2.7 -1.12 -1.66 -0.1 2.25
-0.94 -3.57 -3.51 -2.98 -1.3 0.51 2.12
-1.15 -2.89 -3.06 -3.33 -0.72 0.91 1.89
-0.77 -5.05 -5.29 -4.55 -1.21 -0.4 2.36
Msp_g12681 (MIZ1)
-0.89 -1.8 -3.81 -1.24 -0.88 0.56 1.87
Msp_g13515 (GLS2)
-1.11 -3.04 -4.01 -2.55 -0.37 0.42 2.03
Msp_g14329 (C4H)
-0.83 -1.52 -1.47 -1.26 -0.43 0.43 1.69
-2.23 -3.08 - -6.04 -0.95 0.13 2.33
Msp_g15114 (MYBC1)
-2.23 - - -5.18 -1.03 0.47 2.29
Msp_g15165 (TBL11)
-1.72 -1.81 -3.27 -1.35 -0.27 0.69 1.79
Msp_g17993 (SAG29)
- -3.94 - -3.1 - -0.24 2.58
Msp_g18403 (SD2-5)
-1.11 -2.56 -5.66 -2.9 -0.92 0.57 2.07
-2.31 -3.82 -3.78 -2.5 -1.72 -0.35 2.43
Msp_g19683 (MYB76)
-1.68 -4.84 -4.51 -3.47 -1.22 1.16 1.95
Msp_g20007 (PIN1)
-2.16 -2.1 -2.9 -1.28 -1.56 0.37 2.13
-2.71 -1.07 -1.29 -1.11 -2.8 -0.18 2.16
-1.07 -2.48 -2.9 -2.12 -0.51 0.71 1.86
-0.23 -0.61 -0.61 -0.35 -0.33 0.24 1.05
-1.7 -1.48 -1.83 -1.65 -4.88 0.97 1.9
Msp_g22923 (OMT1)
-1.39 -0.88 -1.34 -0.93 -0.08 -0.07 1.71
-0.58 -3.43 -4.18 -3.72 -2.53 0.54 2.16
-3.04 -3.28 -4.07 -3.2 -0.69 1.02 1.99
Msp_g24149 (C4H)
-1.27 -1.48 -1.69 -1.07 -0.49 0.43 1.76
-4.26 -2.17 -3.61 -2.61 -1.83 -0.38 2.44
Msp_g24927 (PAO2)
-1.34 -1.24 -1.16 -0.9 -0.56 0.55 1.61
Msp_g27004 (HCT)
-0.38 -0.77 -0.52 -0.62 -0.58 -0.02 1.4
-3.37 -2.16 -6.41 -2.16 -3.88 0.01 2.42
-1.98 -1.81 -3.93 -3.79 -5.06 0.85 2.17
Msp_g28100 (AHL22)
-9.49 -7.96 -7.42 -6.59 -6.07 -0.69 2.67
-7.16 -6.34 -6.3 - -4.88 0.56 2.45
-4.38 -3.03 -4.67 -1.94 -1.73 0.73 2.19
Msp_g28963 (XTR3)
-3.76 -2.83 -3.56 -3.19 -1.01 0.18 2.31
-2.17 -4.83 -4.79 - -4.09 0.87 2.27
-1.63 -6.73 -5.5 -5.86 -4.85 -0.05 2.49
Msp_g29163 (ARFA1F)
-1.0 -0.99 -1.97 -0.86 -1.03 0.24 1.81
-4.41 -3.57 - -2.91 -0.59 -0.06 2.35
- - - - -0.85 0.63 2.29
Msp_g29308 (EXL4)
-6.39 -6.17 - - -0.78 -1.45 2.59
-3.92 - - - -3.1 0.82 2.34
-2.81 -4.4 -2.78 -3.24 -3.73 -0.22 2.49
Msp_g29483 (GSTU25)
- - - - - -0.33 2.63
Msp_g29559 (REF1)
-1.93 -0.79 -1.49 -0.91 -0.51 0.52 1.65
-1.55 -1.99 -2.09 -1.26 -2.45 0.5 2.06
Msp_g29722 (TT7)
-2.96 -1.84 -2.88 -1.26 -4.97 0.39 2.23
-4.9 -7.02 -6.89 - -5.0 1.01 2.29
Msp_g29889 (YUC5)
-5.91 - - - - 0.42 2.5
-2.35 -3.92 - -4.7 -0.77 -0.11 2.38
-6.92 - -7.01 -8.22 - 0.74 2.41
- - - - -6.1 -0.13 2.6
-4.3 -5.31 -6.64 -4.24 -8.29 -0.67 2.64
-0.67 - - - -2.05 0.43 2.26
-1.28 -5.07 -3.63 -3.26 -2.97 -0.04 2.4
Msp_g31078 (SD2-5)
-2.03 -3.7 -5.06 -3.85 -1.5 0.81 2.16
Msp_g31091 (PLT2)
- - - - - 1.36 2.15
-3.51 - -6.64 - -4.87 -0.09 2.57
Msp_g31353 (OFP4)
-1.42 -1.59 -1.77 -1.79 -1.61 0.82 1.85
Msp_g31405 (SAG29)
-5.66 -4.87 -7.28 -3.98 -0.38 0.81 2.12
-3.97 - -5.49 - -2.25 0.71 2.34
Msp_g31814 (GSTF9)
-3.84 -5.16 -7.19 -4.62 -1.83 0.94 2.22
- - - - - 0.44 2.5
- - - - - -0.03 2.59
- - - - - 0.65 2.44
-0.79 -4.38 -2.05 -2.76 -1.62 0.38 2.12
Msp_g33610 (CYP71B36)
-0.65 -4.33 -3.84 -3.99 -1.89 0.29 2.23
-1.9 -3.15 -2.89 -2.42 -0.69 0.25 2.16
-0.6 -1.79 -2.76 -3.27 -1.34 -0.28 2.2
-2.72 -6.78 -6.8 -6.19 -0.97 0.22 2.36
Msp_g34207 (CINV2)
-1.01 -0.91 -1.44 -0.89 -0.5 0.09 1.72
-0.43 -2.07 -1.51 -2.5 -0.47 -0.59 2.04
-1.18 -3.37 -2.55 -4.8 -3.24 0.81 2.14
-2.57 -5.26 -5.9 -4.88 -2.11 0.79 2.26
- -2.63 -5.01 -3.22 -3.5 0.91 2.24
-5.7 -9.12 -7.33 -11.23 -3.29 -0.41 2.61
Msp_g36289 (MUR3)
-1.45 -5.93 - - -3.23 -0.03 2.47
-1.53 -4.5 -2.73 -6.15 -0.32 0.64 2.03
-0.9 -3.49 -5.49 -3.55 -1.5 0.9 2.02
Msp_g37725 (PUB13)
-0.72 -4.29 -5.22 -3.67 -0.53 1.04 1.8
-5.1 -8.0 - -8.13 -1.79 -0.62 2.59
Msp_g38743 (ASK1)
-0.09 -3.29 -4.42 -2.25 -1.7 0.17 2.09
-2.14 -3.23 -2.36 - -2.27 0.0 2.4
-0.27 -0.98 -1.29 -1.13 -0.54 -0.09 1.67
-1.6 -6.09 -7.99 -5.54 -1.84 1.25 1.99
-2.32 -5.99 - - -1.62 0.18 2.41
-3.72 -7.87 - -5.33 - 0.26 2.51
-0.95 -1.19 -1.7 -1.39 -0.99 -0.05 1.96
Msp_g41610 (YUC5)
-2.74 - - - -5.37 0.57 2.42
Msp_g41625 (GT18)
-1.88 - - - -2.28 1.06 2.15
-2.0 -6.12 - -4.94 -1.26 0.32 2.33
-0.41 -0.33 -0.52 -0.38 -0.14 0.12 1.0
-0.55 -2.13 -0.76 -2.18 -0.69 -0.25 1.93
-1.59 -6.86 -4.82 -5.11 -3.07 1.3 2.0
-0.46 -5.9 -5.0 -5.6 -1.85 -0.02 2.3
Msp_g47524 (YDA)
-1.04 -1.4 -1.23 -1.51 -1.22 0.51 1.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.