1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g17438

Msp_g17438


Description : not classified & original description: none


Gene families : OG0001091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001091_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g17438
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Adi_g013350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010783 No alias not classified & original description: CDS=95-1060 0.03 OrthoFinder output from all 47 species
Azfi_s0017.g014456 No alias not classified & original description: CDS=94-1260 0.03 OrthoFinder output from all 47 species
    1. Home
    2. Species
    3. em>Nephrolepis biserrata
    4. Sequence
    5. Nbi_g11699

    Nbi_g11699 
    Cba_g11261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Cba_g11262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Cba_g26313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Ceric.09G076700.1 Ceric.09G076700 not classified & original description: pacid=50587974... 0.05 OrthoFinder output from all 47 species
    Ceric.33G015000.1 Ceric.33G015000 not classified & original description: pacid=50607719... 0.06 OrthoFinder output from all 47 species
    Dcu_g10640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Mp2g09370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
    Nbi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Pir_g06140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
    Sacu_v1.1_s0076.g017498 No alias not classified & original description: CDS=1-1059 0.03 OrthoFinder output from all 47 species
    Sacu_v1.1_s0163.g024012 No alias not classified & original description: CDS=52-1167 0.02 OrthoFinder output from all 47 species
    Sam_g39302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
    Smo92349 No alias No description available 0.03 OrthoFinder output from all 47 species

    Type GO Term Name Evidence Source

    No GO annotation available for this sequence
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0000049 tRNA binding IEP HCCA
    MF GO:0000166 nucleotide binding IEP HCCA
    MF GO:0003674 molecular_function IEP HCCA
    MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
    MF GO:0005488 binding IEP HCCA
    MF GO:0005525 GTP binding IEP HCCA
    BP GO:0006399 tRNA metabolic process IEP HCCA
    BP GO:0006520 amino acid metabolic process IEP HCCA
    BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
    BP GO:0006807 nitrogen compound metabolic process IEP HCCA
    BP GO:0008150 biological_process IEP HCCA
    BP GO:0008152 metabolic process IEP HCCA
    MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
    BP GO:0009058 biosynthetic process IEP HCCA
    CC GO:0009521 photosystem IEP HCCA
    CC GO:0009523 photosystem II IEP HCCA
    CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
    BP GO:0009987 cellular process IEP HCCA
    BP GO:0015979 photosynthesis IEP HCCA
    MF GO:0016491 oxidoreductase activity IEP HCCA
    MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
    MF GO:0016874 ligase activity IEP HCCA
    MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
    MF GO:0016887 ATP hydrolysis activity IEP HCCA
    MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
    MF GO:0017076 purine nucleotide binding IEP HCCA
    BP GO:0018130 heterocycle biosynthetic process IEP HCCA
    MF GO:0019001 guanyl nucleotide binding IEP HCCA
    BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
    CC GO:0019898 extrinsic component of membrane IEP HCCA
    MF GO:0030554 adenyl nucleotide binding IEP HCCA
    MF GO:0032553 ribonucleotide binding IEP HCCA
    MF GO:0032555 purine ribonucleotide binding IEP HCCA
    MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
    BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
    BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
    BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
    BP GO:0034660 ncRNA metabolic process IEP HCCA
    MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
    MF GO:0036094 small molecule binding IEP HCCA
    BP GO:0043038 amino acid activation IEP HCCA
    BP GO:0043039 tRNA aminoacylation IEP HCCA
    MF GO:0043167 ion binding IEP HCCA
    MF GO:0043168 anion binding IEP HCCA
    BP GO:0044237 cellular metabolic process IEP HCCA
    BP GO:0044249 cellular biosynthetic process IEP HCCA
    BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
    BP GO:0046483 heterocycle metabolic process IEP HCCA
    MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
    MF GO:0050661 NADP binding IEP HCCA
    BP GO:0071704 organic substance metabolic process IEP HCCA
    MF GO:0071949 FAD binding IEP HCCA
    MF GO:0097159 organic cyclic compound binding IEP HCCA
    MF GO:0097367 carbohydrate derivative binding IEP HCCA
    MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
    MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
    MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
    MF GO:1901265 nucleoside phosphate binding IEP HCCA
    BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
    BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
    MF GO:1901363 heterocyclic compound binding IEP HCCA
    BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
    BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
    BP GO:1901576 organic substance biosynthetic process IEP HCCA
    CC GO:1902494 catalytic complex IEP HCCA
    CC GO:1990204 oxidoreductase complex IEP HCCA
    InterPro domains Description Start Stop
    IPR002347 SDR_fam 66 270
    No external refs found!