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  5. Msp_g16008

Msp_g16008


Description : EC_3.1 hydrolase acting on ester bond & original description: none


Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g16008
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00120050 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00238240 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00239700 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00035520 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00044320 ATPME3, PME3,... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AT3G05610 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT3G06830 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT4G33230 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 OrthoFinder output from all 47 species
Adi_g006880 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g21347 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g07585 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g09872 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G000300.1 PME44, ATPME44,... EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g15947 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g38611 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02809 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03889 No alias EC_3.1 hydrolase acting on ester bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g04854 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07748 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g26672 ATPME3, PME3 EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028041001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01028264001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38560.1 LOC_Os04g38560 pectin methylesterase 0.02 OrthoFinder output from all 47 species
LOC_Os05g29790.1 ATPMEPCRB, LOC_Os05g29790 pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_931259g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp6g15150.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Nbi_g13298 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g22612 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g06076 ATPME2, PME2 EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12664 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Ppi_g55328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021279 ATPMEPCRF, PMEPCRF EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Smo266995 ATPME2, PME2 Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc01g066390.4.1 Solyc01g066390 Probable pectinesterase/pectinesterase inhibitor 58... 0.03 OrthoFinder output from all 47 species
Solyc01g066420.3.1 Solyc01g066420 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc03g078090.4.1 Solyc03g078090 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc06g051960.3.1 Solyc06g051960 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc07g017560.4.1 Solyc07g017560 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc12g099410.2.1 Solyc12g099410 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Tin_g13216 No alias EC_3.1 hydrolase acTing on ester bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007917_P002 Zm00001e007917 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e011069_P001 PME61, Zm00001e011069 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Zm00001e035838_P001 Zm00001e035838 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Zm00001e035932_P003 Zm00001e035932 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 160 308
IPR000070 Pectinesterase_cat 351 647
No external refs found!