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  5. Msp_g15870

Msp_g15870


Description : not classified & original description: none


Gene families : OG0002315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15870
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Als_g02564 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g49633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G040800.1 Ceric.13G040800 not classified & original description: pacid=50636029... 0.03 OrthoFinder output from all 47 species
GSVIVT01036466001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_25115 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g21210.1 LOC_Os09g21210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g01695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_17399g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g21690.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp6g15680.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Smo100942 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g089720.3.1 Solyc02g089720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034014_P001 Zm00001e034014 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e036612_P001 Zm00001e036612 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
InterPro domains Description Start Stop
IPR040720 GH81_C 301 670
IPR040451 GH81_N 27 290
No external refs found!