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Aliases : BARD1, ROW1, ATBARD1
Description : component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer & original description: none
Gene families : OG0001776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001776_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g15829 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00180030 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00067800 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G04020 | BARD1, ROW1, ATBARD1 | breast cancer associated RING 1 | 0.13 | OrthoFinder output from all 47 species | |
| AT4G21070 | BRCA1, ATBRCA1 | breast cancer susceptibility1 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g22116 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g16524 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.17 | OrthoFinder output from all 47 species | |
| Aop_g08732 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.16 | OrthoFinder output from all 47 species | |
| Aop_g10443 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Aspi01Gene06963.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Aspi01Gene29593.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene40923.t1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.06G016800.1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.16G078600.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.19G066200.1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.15 | OrthoFinder output from all 47 species | |
| Ceric.30G011100.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.1 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020537.14 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g334650 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10577 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Dac_g15330 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g10242 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.14 | OrthoFinder output from all 47 species | |
| Dcu_g42186 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_00493 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.17 | OrthoFinder output from all 47 species | |
| LOC_Os04g43300.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.14 | OrthoFinder output from all 47 species | |
| LOC_Os05g43610.1 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g11293 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| MA_12220g0020 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.11 | OrthoFinder output from all 47 species | |
| MA_187851g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.12 | OrthoFinder output from all 47 species | |
| MA_66542g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g00070.1 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.13 | OrthoFinder output from all 47 species | |
| Nbi_g12141 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g26771 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.2 | OrthoFinder output from all 47 species | |
| Ppi_g16822 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007705 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008687 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018874 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Smo414577 | BARD1, ROW1, ATBARD1 | Protein biosynthesis.translation... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g008210.4.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g04261 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.19 | OrthoFinder output from all 47 species | |
| Tin_g03296 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g32798 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... | 0.15 | OrthoFinder output from all 47 species | |
| Zm00001e007590_P001 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e032102_P001 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000796 | condensin complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008608 | attachment of spindle microtubules to kinetochore | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0030261 | chromosome condensation | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031262 | Ndc80 complex | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001357 | BRCT_dom | 529 | 601 |
| No external refs found! |