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  5. Msp_g15283

Msp_g15283 (FTSH12, EMB36, EMB156, EMB1047)


Aliases : FTSH12, EMB36, EMB156, EMB1047

Description : component *(FtsH12) of protein translocation ATPase motor complex & original description: none


Gene families : OG0008369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008369_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15283

Target Alias Description ECC score Gene Family Method Actions
Adi_g020303 FTSH12, EMB36,... component *(FtsH12) of protein translocation ATPase... 0.03 OrthoFinder output from all 47 species
Aop_g20124 FTSH12, EMB36,... component *(FtsH12) of protein translocation ATPase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04615.t1 FTSH12, EMB36,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z112600.1 FTSH12, EMB36,... not classified & original description: pacid=50567678... 0.03 OrthoFinder output from all 47 species
Mp3g06130.1 FTSH12, EMB36,... component FtsH12 of protein translocation ATPase motor complex 0.02 OrthoFinder output from all 47 species
Ppi_g13347 FTSH12, EMB36,... component *(FtsH12) of protein translocation ATPase... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEA Interproscan
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 750 792
IPR003959 ATPase_AAA_core 590 727
IPR000642 Peptidase_M41 823 1021
No external refs found!