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Description : not classified & original description: none
Gene families : OG0003649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003649_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g14117 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00070440 | evm_27.TU.AmTr_v1... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| AT5G15510 | No alias | TPX2 (targeting protein for Xklp2) protein family | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g080102 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g15651 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g15652 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g21234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene04620.t1 | Aspi01Gene04620 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene08613.t1 | Aspi01Gene08613 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.10G034200.1 | Ceric.10G034200 | not classified & original description: pacid=50612324... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g10790 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01011508001 | No alias | No description available | 0.08 | OrthoFinder output from all 47 species | |
| Gb_00785 | No alias | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g11400.1 | LOC_Os03g11400 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g15527 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g27421 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_8291g0010 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g24770.1 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Mp3g08770.1 | No alias | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Nbi_g29711 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Ppi_g17903 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Solyc02g066980.1.1 | Solyc02g066980 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g067100.3.1 | Solyc02g067100 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g51324 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Tin_g44369 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000831_P002 | Zm00001e000831 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e038734_P002 | Zm00001e038734 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR027329 | TPX2_C | 832 | 906 |
| No external refs found! |