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  5. Msp_g12684

Msp_g12684


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12684
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Als_g07604 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12959 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02791 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G066600.1 Ceric.14G066600 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05578 No alias no description available(sp|q7m443|chit2_tulsb : 320.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28080.1 LOC_Os10g28080 no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.03 OrthoFinder output from all 47 species
Len_g30408 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_460451g0010 No alias no description available(sp|q9slp4|chit1_tulsb : 308.0) 0.03 OrthoFinder output from all 47 species
Mp5g12520.1 HCHIB, B-CHI,... no description available(sp|q7m443|chit2_tulsb : 125.0) 0.02 OrthoFinder output from all 47 species
Msp_g29733 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15826 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18287 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.03 OrthoFinder output from all 47 species
Spa_g46052 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 160 300
IPR018392 LysM_dom 37 79
No external refs found!