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Aliases : BRH1
Description : E3 ubiquitin ligase *(BRH) & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00271850 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00200880 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G24580 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G17450 | RHA3A | RING-H2 finger A3A | 0.02 | OrthoFinder output from all 47 species | |
| AT2G27940 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g04809 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02770 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08052 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26269 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene70383.t1 | Aspi01Gene70383 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083100.1 | Ceric.09G083100 | not classified & original description: pacid=50587896... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G013700.1 | RHA3A, Ceric.13G013700 | not classified & original description: pacid=50636450... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G079800.1 | Ceric.29G079800 | not classified & original description: pacid=50625628... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G024600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g11681 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g41558 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g28199 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009098001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012018001 | XERICO | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012020001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01022306001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_15836 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g60730.2 | LOC_Os01g60730 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g29150.1 | ATL8, LOC_Os05g29150 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g38460.1 | XERICO, LOC_Os08g38460 | ubiquitin protein ligase (XERICO) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g02220.1 | LOC_Os12g02220 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g24490.1 | LOC_Os12g24490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18865 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g23800 | BRH1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06594 | XERICO | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29042 | XERICO | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10106144g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_12363g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_129478g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_26001g0020 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_904294g0010 | ATL3 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_9989900g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g14103 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18035 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c23_1651V3.1 | Pp3c23_1651 | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g09527 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12248 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo96681 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g010175.1.1 | RHA2A, Solyc05g010175 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g053640.1.1 | Solyc06g053640 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g075320.1.1 | ATL2, TL2, Solyc09g075320 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g011880.1.1 | Solyc10g011880 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g066510.3.1 | Solyc11g066510 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08408 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03901 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35018 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001923_P001 | ATL3, Zm00001e001923 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014764_P001 | Zm00001e014764 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015905_P001 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032186_P001 | RHA3B, Zm00001e032186 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035560_P001 | ATL3, Zm00001e035560 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039314_P001 | Zm00001e039314 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 100 | 144 |
| No external refs found! |