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Msp_g12251


Description : component *(NOT11) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0005591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12251
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00098040 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g008072 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Aop_g21732 No alias component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Ceric.23G018400.1 Ceric.23G018400 component *(NOT11) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.97 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01000257001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_48786g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g024500.3.1 Solyc04g024500 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g024510.3.1 Solyc04g024510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0030014 CCR4-NOT complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019312 CNOT11 298 422
No external refs found!