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  5. Msp_g12091

Msp_g12091 (AGAL2, AtAGAL2)


Aliases : AGAL2, AtAGAL2

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000574_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12091

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00246520 AGAL2, AtAGAL2,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
Adi_g074251 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38696 AGAL2, AtAGAL2 alpha-galactosidase *(AGAL) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06201 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06381 No alias alpha-galactosidase *(AGAL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24166 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006484001 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_54403g0020 AGAL2, AtAGAL2 Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g07884 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38643 AGAL2, AtAGAL2 alpha-galactosidase *(AGAL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10899 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11113 AGAL2, AtAGAL2 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004492_P001 AGAL2, AtAGAL2,... Alpha-galactosidase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002241 Glyco_hydro_27 76 339
IPR041233 Melibiase_C 355 430
No external refs found!