Aliases : HIS1-3
Description : linker histone *(H1) & original description: none
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G06760 | No alias | winged-helix DNA-binding transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g088302 | HIS1-3 | linker histone *(H1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0049.g030788 | No alias | linker histone *(H1) & original description: CDS=1-786 | 0.04 | OrthoFinder output from all 47 species | |
Cre13.g567450 | HIS1-3 | Chromatin organisation.histones.H1 linker histone | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g00805 | HIS1-3 | linker histone *(H1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g18090.1 | HIS1-3, LOC_Os04g18090 | linker histone (H1) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 38 | 104 |
No external refs found! |