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  5. Msp_g11904

Msp_g11904 (RPS1, ARRPS1)


Aliases : RPS1, ARRPS1

Description : component *(bS1c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11904

Target Alias Description ECC score Gene Family Method Actions
AT5G30510 RPS1, ARRPS1 ribosomal protein S1 0.03 OrthoFinder output from all 47 species
Als_g32395 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g17787 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g41967 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46819.t1 RPS1, ARRPS1,... component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dac_g12960 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g07822 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g03066 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g10266 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g17283 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g07761 No alias component *(bS1c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sam_g09837 No alias component *(bS1c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g04575 RPS1, ARRPS1 component *(bS1c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 96 169
IPR003029 S1_domain 262 332
IPR003029 S1_domain 185 249
No external refs found!