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  5. Msp_g11454

Msp_g11454 (ATRAB8D, ATRABE1B, RABE1b)


Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : translation elongation factor *(EF-Tu) & original description: none


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11454

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00227880 ATRAB8D,... Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
AT4G20360 ATRAB8D, ATRABE1B, RABE1b RAB GTPase homolog E1B 0.12 OrthoFinder output from all 47 species
Adi_g075285 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.1 OrthoFinder output from all 47 species
Aev_g21041 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.15 OrthoFinder output from all 47 species
Aev_g27656 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Ala_g04793 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Als_g08146 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Als_g08147 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Als_g09356 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.11 OrthoFinder output from all 47 species
Als_g23756 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Als_g62452 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Aob_g15070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.1 OrthoFinder output from all 47 species
Aop_g10494 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.14 OrthoFinder output from all 47 species
Aop_g25435 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10728.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36272.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063375 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Cba_g06908 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Cba_g22191 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Cba_g70878 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.14 OrthoFinder output from all 47 species
Ceric.10G078000.1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.15 OrthoFinder output from all 47 species
Cre06.g259150 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dac_g02773 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08765 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Dde_g18792 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g09796 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01007638001 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.17 OrthoFinder output from all 47 species
Gb_29040 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.09 OrthoFinder output from all 47 species
LOC_Os02g38210.1 ATRAB8D,... EF-Tu translation elongation factor 0.09 OrthoFinder output from all 47 species
Len_g22333 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.14 OrthoFinder output from all 47 species
Len_g22334 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Len_g31034 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Len_g39684 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g06070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.11 OrthoFinder output from all 47 species
MA_942991g0010 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.04 OrthoFinder output from all 47 species
Mp1g03870.1 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
Nbi_g13791 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g14071 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Pir_g05476 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g24392 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g24394 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015523 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Sam_g07638 No alias translation elongation factor *(EF-Tu) & original... 0.08 OrthoFinder output from all 47 species
Smo233481 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.1 OrthoFinder output from all 47 species
Solyc03g112150.1.1 ATRAB8D,... EF-Tu translation elongation factor 0.07 OrthoFinder output from all 47 species
Solyc06g071790.3.1 ATRAB8D,... EF-Tu translation elongation factor 0.09 OrthoFinder output from all 47 species
Spa_g10864 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.15 OrthoFinder output from all 47 species
Spa_g22996 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50677 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.07 OrthoFinder output from all 47 species
Tin_g05984 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.17 OrthoFinder output from all 47 species
Zm00001e015008_P001 ATRAB8D,... EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 379 478
IPR000795 T_Tr_GTP-bd_dom 81 282
IPR004161 EFTu-like_2 306 374
No external refs found!