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  5. Msp_g11399

Msp_g11399


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g11399

Target Alias Description ECC score Gene Family Method Actions
AT2G40200 No aliasContact basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g19192 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36805 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08102 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03742 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03913 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01032789001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os01g06640.1 LOC_Os01g06640 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g11910.1 LOC_Os01g11910 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37290.1 BHLH32, ATAIG1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_65818g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g04853 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23095 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17089 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo412681 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc04g006990.3.1 Solyc04g006990 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Tin_g08301 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001119_P001 Zm00001e001119 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016455_P001 BHLH32, ATAIG1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e016835_P001 Zm00001e016835 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e022445_P001 Zm00001e022445 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e038535_P001 Zm00001e038535 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 171 217
No external refs found!