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  5. Msp_g10757

Msp_g10757


Description : carboxy-terminal processing peptidase *(CtpA) & original description: none


Gene families : OG0001069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10757

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00242310 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
AMTR_s00100p00127450 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.plastid.CtpA... 0.06 OrthoFinder output from all 47 species
Adi_g019837 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Aop_g14243 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G086300.1 Ceric.11G086300 carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g420550 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
Dde_g11824 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19495 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01001855001 No alias Protein modification.peptide maturation.plastid.CtpA... 0.02 OrthoFinder output from all 47 species
LOC_Os01g47450.1 LOC_Os01g47450 carboxy-terminal processing peptidase (CtpA) 0.02 OrthoFinder output from all 47 species
Len_g02340 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.05 OrthoFinder output from all 47 species
MA_10425812g0010 No alias Carboxyl-terminal-processing peptidase 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp6g10620.1 No alias carboxy-terminal processing peptidase (CtpA) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014864 No alias not classified & original description: CDS=20-1393 0.04 OrthoFinder output from all 47 species
Solyc12g097030.2.1 Solyc12g097030 carboxy-terminal processing peptidase (CtpA) 0.03 OrthoFinder output from all 47 species
Spa_g07291 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.04 OrthoFinder output from all 47 species
Spa_g07720 No alias carboxy-terminal processing peptidase *(CtpA) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008236 serine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR005151 Tail-specific_protease 369 528
IPR041489 PDZ_6 277 330
No external refs found!