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  5. Msp_g09690

Msp_g09690


Description : RNA editing factor *(MEF14) & original description: none


Gene families : OG0003511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09690
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aop_g11614 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19177 No alias RNA editing factor *(MEF14) & original description: none 0.19 OrthoFinder output from all 47 species
Cba_g09738 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G012700.1 Ceric.04G012700 RNA editing factor *(MEF14) & original description:... 0.06 OrthoFinder output from all 47 species
Len_g13638 No alias RNA editing factor *(MEF14) & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g18987 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00590 No alias RNA editing factor *(MEF14) & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g24073 No alias RNA editing factor *(MEF14) & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022011 No alias RNA editing factor *(MEF14) & original description: CDS=51-1046 0.06 OrthoFinder output from all 47 species
Spa_g02519 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04763 No alias RNA editing factor *(MEF14) & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g11065 No alias RNA ediTing factor *(MEF14) & original description: none 0.13 OrthoFinder output from all 47 species
Zm00001e021512_P002 Zm00001e021512 RNA editing factor (MEF14) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 111 277
IPR013078 His_Pase_superF_clade-1 323 382
No external refs found!