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  5. Msp_g09402

Msp_g09402


Description : not classified & original description: none


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g09402

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00203020 GIL1,... Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00203270 GIL1,... No description available 0.06 OrthoFinder output from all 47 species
AT1G53380 No alias Plant protein of unknown function (DUF641) 0.02 OrthoFinder output from all 47 species
AT2G30380 No alias Plant protein of unknown function (DUF641) 0.03 OrthoFinder output from all 47 species
Ceric.06G053000.1 Ceric.06G053000 not classified & original description: pacid=50620800... 0.03 OrthoFinder output from all 47 species
Ceric.23G039100.1 Ceric.23G039100 not classified & original description: pacid=50610817... 0.05 OrthoFinder output from all 47 species
GSVIVT01024581001 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024812001 GIL1 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_22635 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.02 OrthoFinder output from all 47 species
MA_89652g0010 GIL1 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
Nbi_g21636 GIL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c8_13760V3.1 Pp3c8_13760 Plant protein of unknown function (DUF641) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.04 OrthoFinder output from all 47 species
Solyc07g062310.4.1 Solyc07g062310 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g04632 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Tin_g23463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031256_P001 Zm00001e031256 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 21 157
No external refs found!