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  5. Msp_g08169

Msp_g08169


Description : not classified & original description: none


Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00175790 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Adi_g009502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene38131.t1 Aspi01Gene38131 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene39169.t1 Aspi01Gene39169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67465 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G031500.1 Ceric.11G031500 not classified & original description: pacid=50595562... 0.04 OrthoFinder output from all 47 species
Dcu_g01303 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005871001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g17050.1 CAMBP25,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g31660.1 LOC_Os08g31660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03660.1 CAMBP25,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g36135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_77606g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9255g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g48205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g44462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g031990.1.1 Solyc02g031990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g077130.1.1 Solyc10g077130 Calmodulin-binding protein 25 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g51416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55852 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009218_P001 Zm00001e009218 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013751_P001 Zm00001e013751 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017385_P001 Zm00001e017385 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025135_P001 Zm00001e025135 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039220_P001 Zm00001e039220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 158 180
No external refs found!