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  5. Msp_g08049

Msp_g08049 (CXE17, AtCXE17)


Aliases : CXE17, AtCXE17

Description : not classified & original description: none


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g08049
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00101950 evm_27.TU.AmTr_v1... Probable carboxylesterase 18 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G19190 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G45610 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G16080 CXE17, AtCXE17 carboxyesterase 17 0.02 OrthoFinder output from all 47 species
Adi_g006449 CXE17, AtCXE17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G037200.1 Ceric.04G037200 not classified & original description: pacid=50632590... 0.04 OrthoFinder output from all 47 species
Ceric.14G005800.1 CXE17, AtCXE17,... not classified & original description: pacid=50633010... 0.05 OrthoFinder output from all 47 species
Dcu_g06936 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41340 CXE17, AtCXE17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g12920.1 AtCXE18, CXE18 Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10107 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017757 No alias not classified & original description: CDS=1-1095 0.03 OrthoFinder output from all 47 species
Solyc01g091410.3.1 Solyc01g091410 Probable carboxylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g17086 CXE13, ATCXE13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56319 ATGID1C, GID1C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33623 CXE13, ATCXE13 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 72 295
No external refs found!