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  5. Msp_g07596

Msp_g07596


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07596

Target Alias Description ECC score Gene Family Method Actions
Ala_g14673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69799.t1 Aspi01Gene69799 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0780.g086675 No alias not classified & original description: CDS=1-675 0.03 OrthoFinder output from all 47 species
GSVIVT01030266001 No alias B2 protein OS=Daucus carota 0.04 OrthoFinder output from all 47 species
Lfl_g01714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_121889g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 98.2) 0.02 OrthoFinder output from all 47 species
Zm00001e011644_P004 Zm00001e011644 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 267.0) 0.02 OrthoFinder output from all 47 species
Zm00001e031056_P001 Zm00001e031056 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 97 221
No external refs found!