1. Home
  2. Species
  3. Microlepia speluncae
  4. Sequence
  5. Msp_g06539

Msp_g06539 (TCH3, ATCAL4)


Aliases : TCH3, ATCAL4

Description : calcium sensor *(CML) & original description: none


Gene families : OG0002443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06539
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Adi_g109939 CPK26, ATCPK26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03996 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07140 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69683 ATCML9, CAM9, CML9 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060595 No alias calcium sensor *(CML) & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Cba_g71188 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G089200.1 TCH3, ATCAL4,... calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G089400.1 Ceric.11G089400 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G089600.1 Ceric.11G089600 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G027300.1 ATCML9, CAM9,... not classified & original description: pacid=50601078... 0.03 OrthoFinder output from all 47 species
Dac_g01438 CML42 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09652 CML43 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53700 CML43 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g35719 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38845 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 33 96
IPR002048 EF_hand_dom 130 195
No external refs found!