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  5. Msp_g06438

Msp_g06438 (YCF32, PSBY)


Aliases : YCF32, PSBY

Description : component *(PsbY) of PS-II complex & original description: none


Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06438
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 YCF32, PSBY,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
AT1G67740 YCF32, PSBY photosystem II BY 0.04 OrthoFinder output from all 47 species
Adi_g054387 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04515 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20925 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00628 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00686 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09607 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27429 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07588.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3571.g116308 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G057000.1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original... 0.06 OrthoFinder output from all 47 species
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Dac_g05677 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11818 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51618 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g25972 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00811 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Gb_22296 YCF32, PSBY component PsbY of PS-II complex 0.03 OrthoFinder output from all 47 species
LOC_Os08g02630.1 YCF32, PSBY,... component PsbY of PS-II complex 0.04 OrthoFinder output from all 47 species
Len_g16274 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41372 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
MA_12201g0010 YCF32, PSBY component PsbY of PS-II complex 0.03 OrthoFinder output from all 47 species
Mp8g12730.1 YCF32, PSBY component PsbY of PS-II complex 0.04 OrthoFinder output from all 47 species
Nbi_g00552 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04111 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27683 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g00365 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c8_24120V3.1 YCF32, PSBY, Pp3c8_24120 photosystem II BY 0.02 OrthoFinder output from all 47 species
Ppi_g40546 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28840 No alias component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Smo441673 YCF32, PSBY Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Spa_g16230 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29850 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029235_P001 YCF32, PSBY,... component PsbY of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 234 266
IPR009388 PSII_PsbY 163 195
IPR009388 PSII_PsbY 93 125
No external refs found!