Aliases : AUD1, UXS2, ATUXS2
Description : EC_4.1 carbon-carbon lyase & original description: none
Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Msp_g06332 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G53520 | UXS1, ATUXS1 | UDP-glucuronic acid decarboxylase 1 | 0.03 | OrthoFinder output from all 47 species | |
AT5G59290 | ATUXS3, UXS3 | UDP-glucuronic acid decarboxylase 3 | 0.03 | OrthoFinder output from all 47 species | |
Aev_g02095 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g02174 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g05015 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g42489 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g00559 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G050200.1 | AUD1, UXS2,... | EC_4.1 carbon-carbon lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cre03.g169400 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g05089 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g04380 | UXS5 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025597001 | UXS1, ATUXS1 | Carbohydrate metabolism.nucleotide sugar... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01028014001 | UXS4 | Carbohydrate metabolism.nucleotide sugar... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g62020.1 | AUD1, UXS2,... | UDP-D-glucuronic acid decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g16980.1 | UXS6, LOC_Os03g16980 | UDP-D-glucuronic acid decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
Len_g01759 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Mp2g19470.1 | UXS5 | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000237 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-1446 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0016.g006940 | UXS6 | EC_4.1 carbon-carbon lyase & original description: CDS=142-1230 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0236.g026549 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: CDS=1-1230 | 0.03 | OrthoFinder output from all 47 species | |
Smo267191 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.04 | OrthoFinder output from all 47 species | |
Smo267587 | AUD1, UXS2, ATUXS2 | Carbohydrate metabolism.nucleotide sugar... | 0.05 | OrthoFinder output from all 47 species | |
Solyc10g085920.3.1 | UXS1, ATUXS1,... | UDP-D-glucuronic acid decarboxylase | 0.01 | OrthoFinder output from all 47 species | |
Spa_g15408 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g25943 | AUD1, UXS2, ATUXS2 | EC_4.1 carbon-carbon lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001241_P001 | UXS5, Zm00001e001241 | UDP-D-glucuronic acid decarboxylase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038475_P001 | UXS6, Zm00001e038475 | UDP-D-glucuronic acid decarboxylase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030118 | clathrin coat | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016040 | NAD(P)-bd_dom | 117 | 410 |
No external refs found! |