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  5. Msp_g05550

Msp_g05550


Description : not classified & original description: none


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05550
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT2G46220 No alias Uncharacterized conserved protein (DUF2358) 0.02 OrthoFinder output from all 47 species
Ala_g18667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59382 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0529.g075796 No alias not classified & original description: CDS=57-1280 0.03 OrthoFinder output from all 47 species
Cba_g10474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G031300.1 Ceric.03G031300 not classified & original description: pacid=50572886... 0.04 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.05 OrthoFinder output from all 47 species
Ceric.29G049700.1 Ceric.29G049700 not classified & original description: pacid=50624773... 0.04 OrthoFinder output from all 47 species
Dac_g10250 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g04630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036740001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_20661 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g12200.1 LOC_Os01g12200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52330.1 LOC_Os04g52330 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g12474.1 LOC_Os05g12474 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g01084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07182 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07413 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17265 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e026074_P001 Zm00001e026074 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e041633_P001 Zm00001e041633 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 108 218
No external refs found!