- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0004370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004370_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g04591 | |
| Cluster | HCCA: Cluster_109 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00237990 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00160870 | evm_27.TU.AmTr_v1... | No description available | 0.1 | OrthoFinder output from all 47 species | |
| AT3G02640 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.11 | OrthoFinder output from all 47 species | |
| AT5G16250 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.07 | OrthoFinder output from all 47 species | |
| AT5G36710 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.17 | OrthoFinder output from all 47 species | |
| AT5G36800 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.17 | OrthoFinder output from all 47 species | |
| Ala_g32668 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Als_g04167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04668 | No alias | not classified & original description: none | 0.12 | OrthoFinder output from all 47 species | |
| Aop_g07436 | No alias | not classified & original description: none | 0.22 | OrthoFinder output from all 47 species | |
| Aspi01Gene13483.t1 | Aspi01Gene13483 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene46914.t1 | Aspi01Gene46914 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene67581.t1 | Aspi01Gene67581 | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Cba_g17678 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.28G015700.1 | Ceric.28G015700 | not classified & original description: pacid=50570153... | 0.09 | OrthoFinder output from all 47 species | |
| Dcu_g00561 | No alias | not classified & original description: none | 0.17 | OrthoFinder output from all 47 species | |
| Dcu_g05252 | No alias | not classified & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| GSVIVT01007183001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Gb_21178 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g67110.1 | LOC_Os01g67110 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os04g41900.1 | LOC_Os04g41900 | no hits & (original description: none) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os05g43140.1 | LOC_Os05g43140 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g00262 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Len_g07623 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g31204 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| MA_488033g0010 | No alias | no hits & (original description: none) | 0.14 | OrthoFinder output from all 47 species | |
| Nbi_g39588 | No alias | not classified & original description: none | 0.32 | OrthoFinder output from all 47 species | |
| Ore_g17372 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ppi_g00575 | No alias | not classified & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| Solyc05g055680.4.1 | Solyc05g055680 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25154 | No alias | not classified & original description: none | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e007700_P001 | Zm00001e007700 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018978_P001 | Zm00001e018978 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e028566_P001 | Zm00001e028566 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032081_P001 | Zm00001e032081 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e041147_P001 | Zm00001e041147 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000796 | condensin complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006270 | DNA replication initiation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
| BP | GO:0007076 | mitotic chromosome condensation | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022402 | cell cycle process | IEP | HCCA |
| BP | GO:0030261 | chromosome condensation | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903047 | mitotic cell cycle process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |