Msp_g03965


Description : not classified & original description: none


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03965

Target Alias Description ECC score Gene Family Method Actions
AT2G47440 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G02100 No alias Heat shock protein DnaJ with tetratricopeptide repeat 0.02 OrthoFinder output from all 47 species
Ala_g14384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21471 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06520 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g09974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048903 No alias not classified & original description: CDS=127-2157 0.04 OrthoFinder output from all 47 species
Azfi_s0803.g087553 No alias not classified & original description: CDS=593-2560 0.03 OrthoFinder output from all 47 species
Cba_g02646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10190 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G091800.1 Ceric.07G091800 not classified & original description: pacid=50627264... 0.03 OrthoFinder output from all 47 species
Ceric.12G062700.1 Ceric.12G062700 not classified & original description: pacid=50600807... 0.03 OrthoFinder output from all 47 species
Ceric.32G043600.1 Ceric.32G043600 not classified & original description: pacid=50597338... 0.04 OrthoFinder output from all 47 species
Dac_g01628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028103001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_38343 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g19200.1 LOC_Os03g19200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g49000.1 LOC_Os07g49000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431486g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g01137 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g29002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000162 No alias not classified & original description: CDS=48-2129 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011541 No alias not classified & original description: CDS=1-1935 0.03 OrthoFinder output from all 47 species
Spa_g07917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26011 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09885 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001414_P003 Zm00001e001414 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!