Msp_g03576

Description : not classified & original description: none

Gene families : OG0014412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014412_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g03576

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aop_g03226	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05009	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003690	double-stranded DNA binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	429	452
IPR002885	Pentatricopeptide_repeat	531	556
IPR002885	Pentatricopeptide_repeat	1038	1062
IPR002885	Pentatricopeptide_repeat	660	686
IPR002885	Pentatricopeptide_repeat	834	859
IPR002885	Pentatricopeptide_repeat	461	489
IPR002885	Pentatricopeptide_repeat	937	962
IPR002885	Pentatricopeptide_repeat	356	403
IPR002885	Pentatricopeptide_repeat	254	301
IPR002885	Pentatricopeptide_repeat	759	805
IPR002885	Pentatricopeptide_repeat	860	898
IPR002885	Pentatricopeptide_repeat	557	603
IPR002885	Pentatricopeptide_repeat	963	1009

External Links

No external refs found!