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  5. Msp_g03512

Msp_g03512 (HCF136)


Aliases : HCF136

Description : protein involved in PS-II assembly *(HCF136) & original description: none


Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03512

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083110 HCF136,... Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.09 OrthoFinder output from all 47 species
Adi_g023753 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Aev_g35613 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Ala_g31805 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Als_g23347 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Aob_g06472 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Aop_g09964 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.14 OrthoFinder output from all 47 species
Aspi01Gene72238.t1 HCF136, Aspi01Gene72238 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Cba_g19514 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G037400.1 HCF136, Ceric.10G037400 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Dac_g14607 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g01147 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Dde_g00586 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20509 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01012045001 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.11 OrthoFinder output from all 47 species
Gb_03750 HCF136 HCF136 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g11400 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Lfl_g02953 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
MA_10433328g0010 HCF136 HCF136 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Mp4g23900.1 HCF136 HCF136 protein involved in PS-II assembly 0.14 OrthoFinder output from all 47 species
Nbi_g14696 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Pir_g10204 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g05859 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Ppi_g00841 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009047 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Sam_g07654 No alias protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Solyc02g014150.4.1 HCF136, Solyc02g014150 HCF136 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Spa_g12995 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.15 OrthoFinder output from all 47 species
Zm00001e030125_P002 HCF136, Zm00001e030125 HCF136 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 100 420
No external refs found!