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  5. Msp_g02398

Msp_g02398


Description : not classified & original description: none


Gene families : OG0001547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02398
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00235580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00236400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G61820 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Adi_g014737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05562 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g05810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17185.t1 Aspi01Gene17185 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.23G063800.1 Ceric.23G063800 not classified & original description: pacid=50609651... 0.03 OrthoFinder output from all 47 species
Dac_g06711 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g23344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g42590.3 LOC_Os08g42590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01359 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g26917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g25250.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g25260.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g25270.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g44779 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g61343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo270236 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g04179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011692 Stress_up-reg_Nod19 35 380
No external refs found!