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  5. Msp_g01862

Msp_g01862


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01862

Target Alias Description ECC score Gene Family Method Actions
AT3G08740 No alias elongation factor P (EF-P) family protein 0.02 OrthoFinder output from all 47 species
Aob_g02958 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Aop_g13148 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0359.g066840 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g691000 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.06 OrthoFinder output from all 47 species
LOC_Os12g02380.1 LOC_Os12g02380 EF-P translation elongation factor 0.05 OrthoFinder output from all 47 species
Mp4g02120.1 No alias EF-P translation elongation factor 0.01 OrthoFinder output from all 47 species
Nbi_g06931 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Sam_g14867 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Solyc10g075020.3.1 Solyc10g075020 EF-P translation elongation factor 0.04 OrthoFinder output from all 47 species
Spa_g11669 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039313_P003 Zm00001e039313 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0043043 peptide biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR001059 Transl_elong_P/YeiP_cen 121 171
IPR015365 Elong-fact-P_C 179 234
IPR013185 Transl_elong_KOW-like 53 110
No external refs found!