Msp_g01022 (HSFB4, SCZ, AT-HSFB4)


Aliases : HSFB4, SCZ, AT-HSFB4

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01022

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00016160 HSFB4, SCZ,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
AMTR_s00132p00118400 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AMTR_s00176p00024870 HSFA1B, ATHSF3,... Heat stress transcription factor A-1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Als_g06134 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29196 HSFA2, ATHSFA2 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04765 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13990 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002066001 AT-HSFB2A, HSFB2A RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01011632001 HSFA8, AT-HSFA8 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01016067001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01022134001 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
GSVIVT01033781001 HSFA3, AT-HSFA3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
LOC_Os02g32590.1 HSFA3, AT-HSFA3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g12370.1 HSFA1B, ATHSF3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g45410.1 HSF A4A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_8812600g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.06 OrthoFinder output from all 47 species
Mp4g12230.1 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Pir_g62261 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40245 No alias HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo37324 ATHSF1, HSF1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc02g079180.1.1 AT-HSFA6B,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc04g078770.4.1 HSFB4, SCZ,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc09g009100.4.1 HSFA3, AT-HSFA3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc12g098520.2.1 AT-HSFA5, HSFA5,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Spa_g48007 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027464_P001 HSF A4A,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 22 111
No external refs found!