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  5. Msp_g00547

Msp_g00547 (CTF2A)


Aliases : CTF2A

Description : not classified & original description: none


Gene families : OG0005387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00547

Target Alias Description ECC score Gene Family Method Actions
Aob_g07222 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10412 CTF2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00696 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_24102 No alias Zeaxanthin epoxidase, chloroplastic OS=Oncidium hybrid... 0.03 OrthoFinder output from all 47 species
Len_g11299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01121 CTF2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14026 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53799 CTF2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo447003 No alias Zeaxanthin epoxidase, chloroplastic OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002938 FAD-bd 165 392
No external refs found!