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  5. Msp_g00402

Msp_g00402


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00402

Target Alias Description ECC score Gene Family Method Actions
AT1G19660 No alias Wound-responsive family protein 0.03 OrthoFinder output from all 47 species
Aop_g35496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g089220.3.1 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 135 247
No external refs found!