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  5. Tin_g45441

Tin_g45441 (FH6, ATFH6)


Aliases : FH6, ATFH6

Description : group-I formin acTin filament elongation factor & original description: none


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45441

Target Alias Description ECC score Gene Family Method Actions
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 OrthoFinder output from all 47 species
Adi_g022444 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Adi_g030560 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene13274.t1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Len_g05334 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ore_g36308 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g30754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005202 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 1135 1536
No external refs found!