Tin_g37994


Description : not classified & original description: none


Gene families : OG0001153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001153_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g37994
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Ala_g05618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33016 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g14758 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G038000.1 Ceric.30G038000 not classified & original description: pacid=50609012... 0.03 OrthoFinder output from all 47 species
Ceric.30G038200.1 Ceric.30G038200 not classified & original description: pacid=50608144... 0.03 OrthoFinder output from all 47 species
Ceric.30G038600.1 Ceric.30G038600 not classified & original description: pacid=50609227... 0.03 OrthoFinder output from all 47 species
Ceric.30G038700.1 Ceric.30G038700 not classified & original description: pacid=50608233... 0.11 OrthoFinder output from all 47 species
Ceric.30G039700.1 Ceric.30G039700 not classified & original description: pacid=50608142... 0.08 OrthoFinder output from all 47 species
Ceric.30G053000.1 Ceric.30G053000 not classified & original description: pacid=50608796... 0.07 OrthoFinder output from all 47 species
Dac_g14046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!