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  5. Tin_g35295

Tin_g35295 (VSR2;2, ATVSR3, BP80-2;2, VSR3)


Aliases : VSR2;2, ATVSR3, BP80-2;2, VSR3

Description : lytic vacuole protein sorTing receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g35295
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G30900 VSR6, VSR3;3, BP80-3;3 VACUOLAR SORTING RECEPTOR 6 0.02 OrthoFinder output from all 47 species
AT2G14720 VSR4, VSR2;1,... vacuolar sorting receptor 4 0.03 OrthoFinder output from all 47 species
AT2G34940 VSR5, VSR3;2, BP80-3;2 VACUOLAR SORTING RECEPTOR 5 0.04 OrthoFinder output from all 47 species
AT3G52850 VSR1;1, BP80,... vacuolar sorting receptor homolog 1 0.03 OrthoFinder output from all 47 species
AT4G20110 VSR7, BP80-3;1, VSR3;1 VACUOLAR SORTING RECEPTOR 7 0.07 OrthoFinder output from all 47 species
Als_g05625 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.05 OrthoFinder output from all 47 species
Aob_g03469 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04715.t1 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22822.t1 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G077500.1 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08227 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.04 OrthoFinder output from all 47 species
Dde_g17035 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21720.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52190.1 VSR6, VSR3;3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
MA_10435197g0020 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Mp7g13540.1 VSR4, VSR2;1,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Sam_g09347 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Sam_g29379 No alias lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Solyc10g074980.2.1 AtVSR2,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
Zm00001e038238_P001 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 139 239
No external refs found!