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  5. Tin_g32027

Tin_g32027


Description : TOR-dependent regulatory protein *(MRF) of protein translation & original description: none


Gene families : OG0002034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32027

Target Alias Description ECC score Gene Family Method Actions
Ceric.06G075400.1 Ceric.06G075400 TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Ceric.27G043500.1 Ceric.27G043500 TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Dcu_g01872 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Spa_g22706 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Spa_g53345 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Spa_g56623 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 594 702
IPR003891 Initiation_fac_eIF4g_MI 132 242
IPR003891 Initiation_fac_eIF4g_MI 430 540
IPR003891 Initiation_fac_eIF4g_MI 295 405
No external refs found!