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  5. Tin_g30809

Tin_g30809


Description : not classified & original description: none


Gene families : OG0000290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30809

Target Alias Description ECC score Gene Family Method Actions
AT4G00467 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g043200 NTMC2T5.1, NTMC2TYPE5.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08935 AGD12, ZAC not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g08754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G021000.1 Ceric.17G021000 not classified & original description: pacid=50617770... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001093.6 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.10 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021293.33 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g10819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g42710.1 LOC_Os02g42710 Elicitor-responsive protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Nbi_g08990 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g14843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 50 142
No external refs found!