Tin_g29993

Description : component *(eL14) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0002098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002098_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g29993
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00096180	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT2G20450	No alias	Ribosomal protein L14	0.03	OrthoFinder output from all 47 species
Adi_g022479	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.19G039800.1	Ceric.19G039800	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.32G029000.1	Ceric.32G029000	component *(eL14) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Cre17.g701200	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
GSVIVT01012876001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Gb_21078	No alias	component RPL14 of LSU proteome component	0.02	OrthoFinder output from all 47 species
LOC_Os02g40880.1	LOC_Os02g40880	component RPL14 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_37009g0010	No alias	component RPL14 of LSU proteome component	0.02	OrthoFinder output from all 47 species
MA_99106g0010	No alias	component RPL14 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Pp3c15_5860V3.1	Pp3c15_5860	Ribosomal protein L14	0.02	OrthoFinder output from all 47 species
Pp3c24_20890V3.1	Pp3c24_20890	Ribosomal protein L14	0.01	OrthoFinder output from all 47 species
Sam_g11819	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g38083	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Smo403602	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Spa_g10974	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g23759	No alias	component *(eL14) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Zm00001e010296_P001	Zm00001e010296	component RPL14 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e041233_P002	Zm00001e041233	component RPL14 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002784	Ribosomal_L14e_dom	62	134

External Links

No external refs found!

Tin_g29993

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation