Tin_g28548 (ATPA)

Aliases : ATPA

Description : subunit alpha of peripheral CF1 subcomplex of ATP synthase complex & original description: none

Gene families : OG0001376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001376_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g28548

Target	Alias	Description	ECC score	Gene Family Method
ATCG00120	ATPA	ATP synthase subunit alpha	0.05	OrthoFinder output from all 47 species
Aev_g01324	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Aev_g20803	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.05	OrthoFinder output from all 47 species
Azfi_s0816.g087865	ATP1	not classified & original description: CDS=1-540	0.03	OrthoFinder output from all 47 species
Cba_g02611	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
Ceric.01G056900.1	ATPA, Ceric.01G056900	not classified & original description: pacid=50591476...	0.04	OrthoFinder output from all 47 species
Ceric.03G088300.1	ATP1, Ceric.03G088300	not classified & original description: pacid=50573201...	0.03	OrthoFinder output from all 47 species
Ceric.19G010500.1	ATPA, Ceric.19G010500	not classified & original description: pacid=50575425...	0.04	OrthoFinder output from all 47 species
Ceric.29G005400.1	ATPA, Ceric.29G005400	not classified & original description: pacid=50625214...	0.03	OrthoFinder output from all 47 species
Dde_g22157	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.04	OrthoFinder output from all 47 species
Gb_23670	No alias	ATP synthase subunit alpha, mitochondrial OS=Marchantia...	0.02	OrthoFinder output from all 47 species
LOC_Os04g16740.1	ATPA, LOC_Os04g16740	subunit alpha of peripheral CF1 subcomplex of ATP...	0.06	OrthoFinder output from all 47 species
LOC_Os10g21240.1	ATPA, LOC_Os10g21240	subunit alpha of peripheral CF1 subcomplex of ATP...	0.09	OrthoFinder output from all 47 species
Lfl_g02090	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Lfl_g37428	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.03	OrthoFinder output from all 47 species
Nbi_g04347	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Ore_g20650	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Pir_g15028	ATP1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g18655	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Sam_g00615	No alias	subunit alpha of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Smo137834	ATPA	Photosynthesis.photophosphorylation.ATP synthase...	0.05	OrthoFinder output from all 47 species
Solyc00g500050.1.1	ATPA, Solyc00g500050	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Solyc00g500133.1.1	ATPA, Solyc00g500133	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Solyc00g500203.1.1	ATPA, Solyc00g500203	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Solyc00g500292.1.1	ATPA, Solyc00g500292	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Solyc00g500323.1.1	ATPA, Solyc00g500323	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Solyc00g500332.1.1	ATPA, Solyc00g500332	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Spa_g08033	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Spa_g14018	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	48	113
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	170	385
IPR000793	ATP_synth_asu_C	392	516

External Links

No external refs found!

Tin_g28548 (ATPA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation