1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g27076

Tin_g27076


Description : not classified & original description: none


Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27076

Target Alias Description ECC score Gene Family Method Actions
AT4G30990 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g15020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18323 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000137.1 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre10.g461000 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g13106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021009001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os01g40250.1 LOC_Os01g40250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_131618g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_51913g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g16100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g38147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014135 No alias not classified & original description: CDS=56-8230 0.03 OrthoFinder output from all 47 species
Sam_g17460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444016 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g092240.3.1 Solyc09g092240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016650_P001 Zm00001e016650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046523 UTP20_C 1840 2056
IPR011430 UTP20_N 988 1580
No external refs found!