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  5. Tin_g22549

Tin_g22549 (LUT2)


Aliases : LUT2

Description : lycopene epsilon cyclase *(LCY-e) & original description: none


Gene families : OG0006884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006884_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g22549
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Als_g15688 LUT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15689 LUT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14206.t1 LUT2, Aspi01Gene14206 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008524 LUT2 lycopene epsilon cyclase *(LCY-e) & original... 0.03 OrthoFinder output from all 47 species
Cba_g01169 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.03 OrthoFinder output from all 47 species
Cre06.g267600 LUT2 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Dac_g24635 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g39960.1 LUT2, LOC_Os01g39960 lycopene epsilon cyclase (LCY-e) 0.02 OrthoFinder output from all 47 species
Len_g01326 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.06 OrthoFinder output from all 47 species
MA_10437269g0010 LUT2 lycopene epsilon cyclase (LCY-e) 0.02 OrthoFinder output from all 47 species
Mp7g05820.1 LUT2 lycopene epsilon cyclase (LCY-e) 0.02 OrthoFinder output from all 47 species
Nbi_g08673 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g03904 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19829 LUT2 lycopene epsilon cyclase *(LCY-e) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc12g008980.3.1 LUT2, Solyc12g008980 lycopene epsilon cyclase (LCY-e) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!