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  5. Tin_g21578

Tin_g21578


Description : not classified & original description: none


Gene families : OG0007250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g21578
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00121540 evm_27.TU.AmTr_v1... PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
AT3G56650 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.05 OrthoFinder output from all 47 species
Adi_g015482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02932 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g00819 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g14409 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g02884 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13163 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Ceric.39G037400.1 Ceric.39G037400 not classified & original description: pacid=50583235... 0.08 OrthoFinder output from all 47 species
Cre06.g280150 No alias PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g31306 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Dcu_g00607 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g25294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025792001 No alias PsbP domain-containing protein 6, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g59090.1 LOC_Os01g59090 PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Len_g07272 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Lfl_g12167 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_478623g0010 No alias PsbP domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp8g10770.1 No alias PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Msp_g47911 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g07469 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ore_g09687 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g27494 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g65891 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g12133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo144149 No alias PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Solyc06g065490.3.1 Solyc06g065490 PsbP domain-containing protein 6, chloroplastic... 0.11 OrthoFinder output from all 47 species
Spa_g17127 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 142 299
No external refs found!