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  5. Tin_g19133

Tin_g19133


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g19133
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g029282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05748.t1 Aspi01Gene05748 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21045.t1 Aspi01Gene21045 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44873.t1 Aspi01Gene44873 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45302.t1 Aspi01Gene45302 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60159.t1 Aspi01Gene60159 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68892.t1 Aspi01Gene68892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_10431396g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_913477g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g43759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g113850.1.1 Solyc03g113850 Protein JINGUBANG OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g006340.3.1 Solyc05g006340 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 380 416
IPR001680 WD40_repeat 529 560
IPR001680 WD40_repeat 331 366
No external refs found!