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  5. Tin_g16672

Tin_g16672 (DML1, ROS1)


Aliases : DML1, ROS1

Description : methylcytosine-specific DNA glycosylase *(ROS1) & original description: none


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g16672
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 DME,... DNA damage response.DNA repair mechanisms.base excision... 0.04 OrthoFinder output from all 47 species
Aop_g09000 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Aop_g18309 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71836.t2 DML1, ROS1,... methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Ore_g38428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29566 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.04 OrthoFinder output from all 47 species
Ppi_g49432 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Sam_g25994 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR028925 RRM_DME 1034 1134
No external refs found!