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  5. Tin_g13820

Tin_g13820 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g13820
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Ala_g07982 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g43086 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G018300.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50636147... 0.04 OrthoFinder output from all 47 species
Ceric.13G071700.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50635382... 0.03 OrthoFinder output from all 47 species
Dac_g16164 RBL1, ATRBL1 protease *(RBL) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01019824001 RBL2, ATRBL2 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Len_g24417 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g05540.1 RBL1, ATRBL1 protease (RBL) 0.02 OrthoFinder output from all 47 species
Nbi_g09832 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07906 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12850 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61050 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27837 No alias protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15295 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 111 253
No external refs found!